In Vitro Biological Characterization of a Novel, Synthetic Diaryl Pyrazole Resorcinol Class of Heat Shock Protein 90 Inhibitors

The molecular chaperone heat shock protein 90 (HSP90) has emerged as an exciting molecular target. Derivatives of the natural product geldanamycin, such as 17-allylamino-17-demethoxy-geldanamycin (17-AAG), were the first HSP90 ATPase inhibitors to enter clinical trial. Synthetic small-molecule HSP90 inhibitors have potential advantages. Here, we describe the biological properties of the lead compound of a new class of 3,4-diaryl pyrazole resorcinol HSP90 inhib-itor (CCT018159), which we identified by high-throughput screening. CCT018159 inhibited human HSP90B with comparable potency to 17-AAG and with similar ATP-competitive kinetics. X-ray crystallographic structures of the NH 2-terminal domain of yeast Hsp90 complexed with CCT018159 or its analogues showed binding properties similar to radicicol. The mean cellular GI 50 value of CCT018159 across a panel of human cancer cell lines, including melanoma, was 5.3 Mmol/L. Unlike 17-AAG, the in vitro antitumor activity of the pyrazole resorcinol analogues is independent of NQO1/ DT-diaphorase and P-glycoprotein expression. The molecular signature of HSP90 inhibition, comprising increased expression of HSP72 protein and depletion of ERBB2, CDK4, C-RAF, and mutant B-RAF, was shown by Western blotting and quantified by time-resolved fluorescent-Cellisa in human cancer cell lines treated with CCT018159. CCT018159 caused cell cytostasis associated with a G 1 arrest and induced apoptosis. CCT018159 also inhibited key endothelial and tumor cell functions implicated in invasion and angiogenesis. Overall, we have shown that diaryl pyrazole resorcinols exhibited similar cellular properties to 17-AAG with potential advantages (e.g., aqueous solubility, independence from NQO1 and P-glycoprotein). These compounds form the basis for further structure-based optimization to identify more potent inhibitors suitable for clinical development.


Introduction
The molecular chaperone heat shock protein 90 (HSP90) regulates the stability, activation, and biological function of numerous oncogenic client proteins, including steroid hormone receptors, kinases (e.g., ERBB2, C-RAF, B-RAF, and CDK4), and other proteins (e.g., mutant p53, hTERT, and HIF1a; ref. 1).The HSP90 chaperone machine is driven by ATP binding and hydrolysis (2).Its activity is regulated by co-chaperones (e.g., HSP72, CDC37, P23, CHIP, and immunophilins) that affect the balance between stabilization and degradation of clients via the ubiquitin-proteasome pathway (3,4).HSP90 inhibitors are therefore of interest.Therapeutic selectivity for cancer versus normal cells could derive from the stressed conditions associated with malignancy (5), oncogene addiction, and the greater dependence on HSP90 of mutated versus wild-type oncoproteins, as exemplified recently with B-RAF (6,7).Because HSP90 client proteins are associated with many oncogenic signaling pathways, pharmacologic blockade of HSP90 function should deliver a combinatorial effect on all the hallmark traits of malignancy (8).
Experience with the natural products generated interest in alternative chemotypes (29)(30)(31).The first synthetic small-molecule NH 2 -terminal ATP site-binding inhibitors were designed by Chiosis et al. based on a purine scaffold (32,33).Purines with improved aqueous solubility and oral bioavailability have been described (33).
Using high-throughput screening to identify inhibitors of the intrinsic NH 2 -terminal ATPase activity of yeast Hsp90 (34), we discovered the novel synthetic 3,4-diaryl pyrazole resorcinol inhibitor CCT018159 (35).Structure-based design generated a series of active analogues (36,37).Here, we provide the first detailed characterization of the biological properties of CCT018159 and related derivatives.The results show that CCT018159 is a representative of a new class of fully synthetic molecules with potential for development as novel anticancer agents.
Cell lines.Unless otherwise stated, all cell lines were from the American Type Culture Collection (LGC Promochem, Middlesex, United Kingdom).All human cancer cell lines were grown in DMEM /10% FCS, 2 mmol/L glutamine, and nonessential amino acids in 5% CO 2 .The human umbilical vein endothelial cells (HUVEC) and the prostate carcinoma cell line PC3LN3 were cultured as described (38).MCF10a cells derived from human mammary gland were maintained in DMEM-Ham's F12 mix (Invitrogen Ltd., Paisley, United Kingdom) and 10% FCS, 10 Ag/mL insulin, 20 ng/mL epidermal growth factor, 100 ng/mL cholera toxin, and 500 ng/mL hydrocortisone.The human prostate epithelial cell line PNT2, immortalized with SV40 (European Collection of Animal Cell Cultures, Wiltshire, United Kingdom), was grown in RPMI 1640 (Invitrogen) and 10% FCS.All lines were free of Mycoplasma contamination (Venor GeM kit, Minerva Biolabs, Berlin, Germany).
Production of recombinant HSP90 and AHA1.Expression and purification of recombinant full-length human HSP90h, full-length yeast Hsp90, and NH 2 -terminal domain and yeast AHA1 was as described (39,40).
X-ray crystallography.Crystallization of the yeast Hsp90 NH 2 -terminal domain has been described (39).An aliquot (5 AL) of inhibitor at 50 mmol/L stock concentration was added to 1 mL of HSP90 NH 2 -terminal domain at 4 mg/mL in 20 mmol/L Tris (pH 7.5) and 1 mmol/L EDTA.The complex was concentrated to 200 AL (20 mg/mL) and crystallized by the hanging drop method.
Colorimetric determination of ATPase activity.Inhibition of ATPase activity of recombinant yeast Hsp90 or recombinant human HSP90h in the presence of the co-chaperone AHA1 (40) was determined using the malachite green assay (34).Briefly, different inhibitor concentrations were added to 400 Amol/L ATP (Sigma-Aldrich), 400 nmol/L yeast Hsp90 or 2 Amol/L human HSP90h and 30 Amol/L AHA1 in 100 mmol/L Tris-HCl (pH 7.4), 20 mmol/L KCl, and 6 mmol/L MgCl 2 .IC 50 values were determined as the concentration causing 50% inhibition compared with vehicle controls.
K i values against recombinant full-length human HSP90 ATPase activity were determined as follows.Enzyme activity for 3.3 Ag protein was assayed at 2.5 Amol/L compound across a range of ATP concentrations (0.2-2 mmol/L).The double reciprocal plot of 1/velocity against 1/substrate concentration was used to determine the type of inhibition and a secondary plot of x intercept against concentration generated K i values (Graphpad Prism, San Diego, CA).
Biochemical selectivity of CCT018159.The malachite green assay (34) was used to determine the biochemical selectivity of CCT018159 versus human HSP72 ATPase activity (SPP-776F; Stressgen, Victoria, Canada) at 400 Amol/L ATP and 1.2 Amol/L protein.Selectivity towards human topoisomerase II ATPase was determined using DNA decatenation to measure functional activity (TopoGen assay kit, Port Orange, FL); 200 ng catenated DNA with 6 units of enzyme were used.Kinase profiling was carried out by Upstate (Charlottesville, VA).
Fluorescence polarization assay.Competitive binding of inhibitors to full-length human HSP90h was measured using a fluorescent pyrazole resorcinol probe (41).Relative binding affinities for HSP90 in lysates from cancer and nontumorigenic cell lines were also measured by fluorescence polarization assay.
Growth inhibition assay.Cellular sensitivity to HSP90 inhibitors was measured by sulforhodamine B (SRB) assay (15).Sensitivity of HUVEC was determined using an alkaline phosphatase colorimetric method (38).The GI 50 was calculated as the concentration that inhibits cell proliferation by 50% compared with vehicle controls.
Western blotting.Protein extracts and Western blotting were done as described (15).Antibodies are described in Supplementary Materials.
Apoptosis studies.Attached and trypan blue-negative detached cells were counted using a hemacytometer.Poly(ADP-ribose) polymerase (PARP) cleavage was detected by Western blotting using an antibody (Clontech, Oxford, United Kingdom) that recognizes the 116-kDa native PARP and the 85-kDa apoptosis-related cleavage product (16).Functional studies on human endothelial and tumor cells.In vitro chemomigration in response to soluble ligands, haptotaxis assays (migration on a solid substrate), and cellular differentiation on Matrigel using HUVEC and/or PC3LN3 human prostate carcinoma cells and LICR-LON-HN6 head and neck squamous carcinoma cells were determined as described (38,43).

Results
Protein X-ray crystallography.Protein X-ray crystallography at 1.6 to 2.5A ˚resolution confirmed that radicicol, CCT018159, CCT072453, and CCT072440 (Fig. 1) all bind to the ATP site within the yeast Hsp90 NH 2 -terminal domain (Fig. 2).The carboxylate side chain of Asp 79 forms two hydrogen bonds (Fig. 2A, left), one via a tightly bound water molecule, to two of the radicicol oxygens (9).The same tightly bound water is hydrogen bonded to the mainchain amide group of Gly 83 and the hydroxyl side chain of Thr 171 .Another hydrogen bond exists between the main-chain carbonyl of Leu 34 , via a second water molecule, to a third radicicol oxygen, and yet another contact is formed between the q-amino side chain of Lys 44 and the radicicol epoxide oxygen.Other interactions are van der Waals contacts (Asn 37 , Asp 40 , Ala 41 , Ile 82 , Met 84 , Phe 124 , and Ile 173 ; Fig. 2A, left).The pyrazole resorcinol CCT018159 binds similarly (35), except that the hydrophilic Lys 44 and hydrophobic Asp 40 interactions are lost (Fig. 2A, right).However, an additional hydrophobic interaction is established with Leu 93 , whereas the main-chain carbonyl of Gly 83 and one of the ring nitrogens of CCT018159 form a new hydrophobic contact, as with the other pyrazole analogues (Fig. 2B ).For CCT072453, the protein interactions are exactly the same as for radicicol and include contacts with Lys 44 and Asp 40 (Fig. 2B, left), but not with Leu 93 as seen for CCT018159.In contrast, for CCT072440, the Lys 44 and Asp 40 interactions are lost, and there is also no interaction with Leu 93 (Fig. 2B, right).The 5 ¶-ethyl group on the resorcinol ring of CCT018159 and the equivalent 5 ¶-chloro group of CCT072440 and CCT072453 reside in a hydrophobic pocket, contributing to potency (see later).The superimpositions (Fig. 2C) show that the pyrazole resorcinols and radicicol all occupy a similar space within the HSP90 ATP-binding site.
HSP90 binding and ATPase inhibition.Isothermal titration calorimetry with full-length recombinant human HSP90h gave a dissociation constant (K d ) of 0.47 Amol/L for CCT018159.K d values were about 2-fold lower for the 5 ¶-chloro analogue CCT072440 (0.24 Amol/L), the 5 ¶-chloro analogue with a cyanopropyloxy substituent replacing the dioxan ring CCT072453 (0.25 Amol/L), and geldanamycin (0.24 Amol/L).The less-potent analogue CCT066961 (Fig. 1), lacking a chloro or ethyl substituent at C-5 in the resorcinol ring, gave a K d value of 4.0 Amol/L.Radicicol showed tighter binding with a K d of 0.007 Amol/L.In the presence of recombinant human HSP90 ATPase-activating protein AHA1 (40), CCT018159 binding to HSP90h was similar (K d = 0.37 Amol/L).Incubation of CCT018159 and geldanamycin for 24 h at room temperature did not markedly alter the K d (0.53 and 0.32 Amol/L, respectively).
CCT018159, 17-AAG, and geldanamycin acted as competitive inhibitors with respect to ATP against the full-length recombinant human HSP90 ATPase, assayed with AHA1 using the malachite green method.CCT018159 exhibited a K i of 1.8 F 0.29 Amol/L (mean F SE, n = 3), which was similar to that for 17-AAG (1.4 F 0.32 Amol/L) and geldanamycin (1.8 F 0.22 Amol/L).
The IC 50 value for CCT018159 against the ATPase activity of full-length yeast Hsp90 at 400 Amol/L ATP was 6.6 F 0.5 Amol/L (mean F SE, n = 3).The 5 ¶-chloro analogues CCT072440 and CCT072453 were 10-fold more potent than CCT018159 (Table 1A).They were also more potent than CCT018159 against the recombinant full-length HSP90h with AHA1, but the difference was smaller (Table 1A).The analogue CCT066961, lacking a chloro or ethyl substituent at C-5 in the resorcinol ring (Fig. 1), was 15-fold less potent against both yeast and human HSP90 compared with CCT018159 (Table 1A).
The more sensitive fluorescence polarization assay gave IC 50 values for human HSP90h 5-to 10-fold lower than the malachite green method.CCT072440 and CCT072453 were confirmed as 2-to 3-fold more potent than CCT018159, whereas CCT066961 was 12-fold less potent (Table 1A).
The fluorescence polarization assay was used to determine the relative binding affinity of CCT018159, 17-AAG, and geldanamycin for HSP90 in lysates from human tumor cells (HCT116 colorectal and WM266.4 melanoma) and nontumorigenic cells (HUVECs, MCF10a human mammary gland epithelial cells, and PNT2 human prostate epithelial cells).For all three inhibitors, the binding affinity was similar in lysates from tumor and nontumorigenic cells (Table 1B).In each case, the IC 50 for binding to HSP90 in the cell lysates was about 2-fold lower than that seen with purified recombinant HSP90h.
Biochemical selectivity of CCT018159.At 10 and 100 Amol/L CCT018159, no inhibition was observed against human HSP72
The growth-inhibitory activity of CCT018159 was determined against a range of human cancer cell lines.Although CCT018159 was less potent than 17-AAG, in some lines (e.g., CH1 ovarian and BE colon carcinoma), the difference was only 3.6-to 10-fold (Table 2).The mean GI 50 (FSE) for CCT018159 across the tumor cell panel was 5.3 F 2.5 Amol/L, with the lowest GI 50 seen in the MCF7 breast cancer cells (1.4 F 0.05 Amol/L) and CH1 cells (2.6 F 0.4 Amol/L).Except for the more resistant HT29 colon carcinoma cell line, the GI 50 values for CCT018159 varied only 6-fold from 1.4 Amol/L in MCF7 cells to 8.2 Amol/L in SKMEL 5 melanoma cells.In contrast, 17-AAG exhibited a 82-fold range across the cancer cell panel, probably due to varying levels of NQO1 (see later).CCT018159 undergoes rapid glucuronidation both in mice and mouse liver microsomes (44).We showed extensive loss of parent CCT018159 and formation of the corresponding glucuronide in HT29 cells, to a much greater extent than in HCT116 cells (Supplementary Fig. S1), suggesting an explanation for the resistance of HT29 cells.CCT018159 inhibited HUVEC proliferation with a GI 50 of 0.87 F 0.3 Amol/L (mean F SE, n = 3; Table 2).This indicates greater sensitivity than the tumor cells and is consistent with inhibitory effects of CCT018159 on the functions of activated endothelial cells described later.In contrast, nonmalignant prostate cells (PC3LN3) exhibited similar sensitivity to CCT018159 when compared with majority of the tumor cells tested, whereas mammary epithelial cells (MCF10a) were more resistant.For 17-AAG, HUVEC response was similar to, but not greater than, that of the more sensitive cancer cells.The nontumorigenic breast and prostate epithelial cell lines had GI 50 values close to those for the more resistant tumor cell lines.
Effect of NQO1/DT-diaphorase on cellular sensitivity to HSP90 inhibitors.We previously reported that cancer cells with low NQO1 levels were much less sensitive to 17-AAG and proposed that this is due to reduction of the quinone to a more active HSP90 inhibitor (15).Recent studies confirmed that the greater activity of 17-AAG in high NQO1 cell lines was caused by metabolism to the more potent hydroquinone (25).Hence, we investigated the effect of NQO1 expression on sensitivity to CCT018159, which lacks the quinone moiety (Fig. 1).The melanoma cell lines exhibit a range of NQO1 activities (15), with SKMEL 5 and WM266.4 expressing the highest levels, SKMEL 28 expressing intermediate level, and SKMEL 2 expressing the lowest activity.This reflects the order of sensitivity to 17-AAG (Table 2).Cellular sensitivity of CCT018159 in the melanoma cell lines did not correlate with NQO1 status.As before (15), 17-AAG was much less active in the BE human colon tumor cells, which carry an inactivating NQO1 polymorphism, compared with HT29 counterparts with naturally high NQO1 levels (P < (A) Enzyme assays were carried out using full-length yeast Hsp90 or human HSP90h, the latter in the presence of the activating protein AHA1, using the malachite green method (34).The fluorescence polarization competitive binding assay was carried out with human HSP90h using a fluorescent pyrazole resorcinol probe (41).Cell growth inhibitory activities are also shown; these were carried out in HCT116 human colon cancer cells using the SRB endpoint.Values represent mean F SE (n = 3).(B) The amount of cell lysate that gave an anisotropy reading corresponding to 30 nmol/L human HSP90h was used (4 nmol/L for HCT116 and PNT2 cells and 12 nmol/L for WM266.4,HUVEC, and MCF10a cells).Values represent mean F SE (n = 3-5).
0.0001; Table 2).Furthermore, 17-AAG was confirmed as less active (P < 0.0001; Table 2) in the BE vector control line compared with its isogenic counterpart transfected with the NQO1 gene and expressing similar high NQO1 activity to HT29 cells (15).In contrast, CCT018159 showed no differences in potency between this isogenic pair (P = 0.9; Table 2).The GI 50 values for the 5 ¶-chloro analogue CCT072453 in the BE vector control and transfected BE2 cell lines were also similar (11.0 F 2.1 and 11.9 F 1.3 Amol/L, respectively; mean F SE, n = 3; P = 0.2).These results indicate that unlike 17-AAG, the activity of the pyrazole resorcinols is independent of NQO1.Sensitivity of acquired drug-resistant cancer cells to HSP90 inhibitors.We previously reported that P-glycoprotein, the product of the MDR1 multidrug resistance gene, confers resistance to 17-AAG (15).We confirmed that 17-AAG was 4.6-fold less active (P < 0.0001) in the doxorubicin-induced, drug-resistant variant CH1doxR compared with the parental CH1 human ovarian cancer cell line.In contrast, CCT018159 showed no difference in activity between the two lines (P = 0.1; Table 2).The 5 ¶-chloro analogues CCT072453 and CCT072440 also exhibited no cross-resistance (GI 50 for CCT072453 = 6.8 F 2.4 Amol/L in the parental CH1 cells and 4.0 F 1.2 Amol/L in CH1doxR; GI 50 for CCT072440 = 2.5 F 0.8 and 2.9 F 1.1 Amol/L in CH1 and CH1doxR, respectively; P > 0.1).The MDR1 reversal agent R -verapamil reduced the level of doxorubicin resistance to 17-AAG in the CH1doxR from 4.6-to 1.3-fold (GI 50 values for 17-AAG plus 6 Amol/L R-verapamil in CH1 and CH1doxR were 0.8 F 0.02 and 1.0 F 0.01 Amol/L, respectively).No R-verapamil-induced changes in GI 50 values were observed with CCT018159 (P > 0.1; data not shown).These results suggest that the pyrazole resorcinols are not subject to P-glycoprotein-mediated multidrug resistance.
The in vitro potencies of CCT018159 and 17-AAG were also compared in the HT29 human colon cancer cell line and its counterpart with acquired resistance to oxaliplatin (45).CCT018159 and 17-AAG exhibited similar cellular activity in the HT29oxaliR cells compared with the parental line (P = 0.14 and 0.9 for CCT018159 and 17-AAG, respectively; Table 2).Thus, both HSP90 inhibitors are able to retain activity in these platinum-resistant cells.
Molecular signature of HSP90 inhibition induced by CCT018159.17-AAG causes depletion of client proteins, such as C-RAF, ERBB2, and CDK4, and induction of HSP72 in human cancer cell lines (14)(15)(16).This molecular signature of HSP90 inhibition was validated in human tumor xenografts and used to confirm the mechanism of action of 17-AAG in patients (17,20).Both CCT018159 and 17-AAG induced HSP72 and decreased C-RAF, ERBB2, and CDK4 expression in SKMEL 28 melanoma cells (Fig. 3A).A similar level of HSP72 induction and depletion of client proteins by CCT018159 or 17-AAG was also seen in other human cancer cells (e.g., A2780 and CH1 ovarian cells and HT29 and HCT116 colon cells; data not shown except for A2780; Supplementary Fig. S2).The detailed kinetics of client protein depletion was cell line dependent.For example, CCT018159 depleted C-RAF more rapidly in the A2780 line compared with SKMEL 28 (Supplementary Fig. S2; Fig. 3A).However, ERBB2 was consistently the most sensitive client protein, as measured by both rapid disappearance (Fig. 3A) and by concentrationresponse data (i.e., depletion at 1 Â GI 50 ; data not shown).The 5 ¶-chloro analogues CCT072440 and CCT072453 also showed the same HSP90 inhibition signature in HCT116 cells (data not shown).The less active analogue CCT066961 exhibited no HSP72 induction or client protein depletion at 28 Amol/L (equivalent to  (58).cAcquired resistance to oxaliplatin (45).bAcquired resistance to doxorubicin, high levels of P-glycoprotein (59).
We and others (6, 7) recently reported that oncogenic mutant B-RAF is an HSP90 client protein and is degraded following 17-AAG treatment of melanoma cells.Figure 3C shows that CCT018159 and 17-AAG caused comparable depletion of V600E B-RAF in SKMEL 28 melanoma cells (46).In contrast, no depletion of wild-type B-RAF was seen in SKMEL 5 cells with CCT018159 (Fig. 3C) or 17-AAG (6).
Cell cycle effects.Flow cytometry with PI staining showed that CCT018159 or 17-AAG at 5 Â GI 50 concentrations (41 and 0.07 Amol/L, respectively) caused marked accumulation in the G 1 phase in SKMEL 5 (Fig. 4A) and other melanoma lines (data not shown).Continuous BrdUrd labeling and bivariate Hoechst-PI flow cytometry showed that both HSP90 inhibitors arrested cells in the initial G 1 or subsequent G 1 * phase (Fig. 4A).Cytostatic versus apoptotic effects.All the melanoma cell lines treated with CCT018159 or 17-AAG showed a cytostatic growth inhibitory response up to 96 h (SKMEL 28 cells shown in Fig. 4B).Treatment of SKMEL 28 cells for 24 h with 14.5 Amol/L CCT018159 or 0.105 Amol/L 17-AAG (both equivalent to 5 Â GI 50 concentrations) caused an increase (6-and 1.9-fold, respectively) in trypan blue-negative detached cells (Fig. 4C).After 48 h, the number of detached cells after treatment with 17-AAG increased by 8.1-fold (data not shown).Cells treated with CCT018159 resulted in an increased in cell debris after 48 h (data not shown).Apoptosis was confirmed by PARP cleavage in detached SKMEL 28 cells treated with CCT018195 or 17-AAG (Fig. 4D).Note in Fig. 4D that equal amounts of protein were loaded for the detached treated and control cells, and hence, both also showed similar levels of cleaved PARP.In the controls, this represented the background level of cell death.However, the number of apoptotic cells was increased after treatment with CCT018159 or 17-AAG, when compared with control (Fig. 4C).
Functional studies in HUVEC and tumor cells.As shown above (Table 2), HUVECs were very sensitive to growth inhibition by CCT018159.A 24-h exposure of HUVEC to CCT018159 gave a dose-dependent increase in HSP72 and decrease in AKT expression (Fig. 5A).CCT018159 also inhibited expression of the major angiogenic cytokine receptor (VEGFR-2).CCT018159 induced a dose-dependent inhibition of HUVEC migration in response to FCS, vascular endothelial growth factor (VEGF), and basic fibroblast growth factor (Fig. 5B).Ability to close a ''wound'' made in confluent cell monolayer (haptotaxis) was inhibited by 60% at 5 Â GI 50 concentrations of CCT018159.Reduction of the HSP90 client protein FAK has been shown to delay haptotaxis (38).CCT018159 reduced FAK phosphorylation at Tyr 576/577 (47), with moderate effects on total FAK (Fig. 5A).CCT018159 reduced the tubular differentiation of HUVEC plated on Matrigel over 24 to 48 h (Fig. 5C).In the PC3LN3 prostate tumor cell line, haptotaxis was inhibited by 50% at 5 Â GI 50 concentration of CCT018159.In addition, differentiation of PC3LN3 and LICR-LON HN6 head and neck squamous carcinoma tumor cells on Matrigel (which requires engagement with matrix proteins and cell motility) was reduced by 54% and 72%, respectively, at 5 Â GI 50 concentrations of CCT018159.
These results show that, as exemplified by CCT018159, the diaryl pyrazole resorcinols have the potential to inhibit invasion and angiogenesis as part of their combinatorial anticancer effects, as previously shown for 17-AAG (38).

Discussion
The widely studied HSP90 inhibitors, such as 17-AAG, geldanamycin, and radicicol, inhibit the essential ATPase activity of HSP90 by competing at the NH 2 -terminal ATP site (9).However, despite promising molecular effects and clinical activity with 17-AAG (17,20), the natural product-based inhibitors have significant limitations and synthetic small-molecule inhibitors are eagerly sought (30,31,37).The first of these were designed by Chiosis et al. based on the purine scaffold and show considerable promise (32,33).Next, the diaryl pyrazole resorcinols were identified by high-throughput screening (34,35,48).Here, we provide the first detailed description of the biological properties of the lead compound CCT018159 and two related analogues in human cancer cell lines and certain nontumorigenic cells.Protein X-ray crystallography confirmed that the pyrazole compounds and radicicol, which share the resorcinol unit, bind in a very similar way to the yeast Hsp90 ATP site in the NH 2terminal domain (Fig. 2C).The binding mode involves an intricate network of hydrogen bond interactions between the phenolic hydroxyl groups in the resorcinol moiety of the pyrazoles or radicicol and the protein plus key water molecules.Some specific differences were identified between the pyrazoles and radicicol and between the individual pyrazole compounds.In contrast to radicicol, an additional hydrophilic interaction is established .BrdUrd (10 Amol/L) and CCT018159 (or 17-AAG) were added at the same time and incubated for 16, 24, 48, and 72 h before fixing with ethanol.Control cells were treated with vehicle and BrdUrd.No BrdUrd or compound was added to control cells at 0 h.Hoechst/PI stain was added immediately before analysis by flow cytometry.The results were replicated in three independent experiments.Results showed that SKMEL 5 cells treated with CCT018159 or 17-AAG caused a G 1 arrest at 16 h.By 24 h, cells in the original G 2 have moved to the new G 1 * phase and remained blocked at that point.B, quantitation of attached total cell counts.SKMEL 28 cells were treated with vehicle control (n) or 14.5 Amol/L CCT018159 (.) or 0.105 Amol/L 17-AAG (4) for 0, 24, 48, 72, and 96 h.Attached cells were counted using a hemacytometer.C, detached SKMEL 28 cells (as % total cells) following treatment with 14.5 Amol/L CCT018159, 0.105 Amol/L 17-AAG, or vehicle control for 24 h.D, quantitation of detached cells.Equal amounts of protein were loaded from the detached control and treated SKMEL 28 cells after 72 h, and PARP cleavage was detected in both detached populations by Western blotting.The PARP antibody recognizes the 116-kDa native PARP and the 85-kDa apoptosis-related cleavage product.Lysates from the attached population (72 h) were used as control.Note, however, that although PARP cleavage is seen in both control and treated samples, both HSP90 inhibitors caused an increase in the number of detached, apoptotic cells (C ).
between the main-chain carbonyl of Gly 83 and one of the ring nitrogens of the pyrazoles.The 5 ¶-ethyl group in the resorcinol ring of CCT018159 and the equivalent 5 ¶-chloro group of CCT072440 and CCT072453 occupy a hydrophobic pocket, contributing to potency (see later).The crystallography studies were carried out with yeast Hsp90.The yeast and human enzymes exhibit 88% similarity (70% identity) between their NH 2 -terminal domains, with only two differences within 5 A ˚of bound ADP.These are Ala 38  (human Ser 52 ) and Leu 173 (human Val 186 ), which are f4 and 5A from the exocyclic N6 of the adenyl ring of ADP, respectively.Consequently, all the key interactions with ADP, ATP, and various HSP90 inhibitors are essentially the same.Comparison of the binding of CCT018159 with the yeast and human HSP90a confirms a high degree of similarity (36).
Dissociation constants (K d values) determined by isothermal titration calorimetry were similar for CCT018159 and 17-AAG but higher than for radicicol.The human HSP90 ATPase-activating protein AHA1 did not appreciably alter the CCT018159 K d and had no effect on enzyme inhibition.Compared with CCT018159, analogues CCT072440 and CCT072453 (Fig. 1) showed improved binding to, and inhibition of, both yeast protein and human fulllength HSP90, as measured by a variety of assays.Structure-activity relationships for a larger analogue series supports the importance of the interaction of 5 ¶-substituents, especially ethyl and chloro, with the hydrophobic pocket mentioned above (35)(36)(37).Replacement of 5 ¶-ethyl in CCT018159 with 5 ¶-chloro in both CCT072440 and CCT072453 improves potency, whereas CCT066961, lacking the 5 ¶-substituent, is much less potent in all biological assays.
Enzyme kinetic analysis showed that CCT018159, 17-AAG, and geldanamycin inhibit human HSP90 competitively with respect to ATP, consistent with the binding mode, and have similar K i values.
Concerning biochemical selectivity, CCT018159 was inactive against two other ATPases (i.e., the structurally related human topoisomerase II and the structurally unrelated but biologically linked HSP72).In addition, CCT018159 exhibited generally weak activity at 50 Amol/L against various kinases, with the exception of LCK.Thus, CCT018159 exhibits promising selectivity for a lead compound against HSP90.It is likely that selectivity will be improved even further during lead optimization.
In terms of antiproliferative properties against HCT116 human colon cancer cells, the modest 2-to 3-fold increase in enzyme potency compared with CCT018159 seen for the 5 ¶-chloro compounds was not translated into cellular activity, presumably due to physicochemical and permeability factors.More significantly, although the pyrazole compounds have similar micromolar potency against HSP90h to 17-AAG, the latter is more potent in cells; however, in some tumor lines, the difference was only 3-to 10-fold.This discrepancy between target and cell activity is not surprising for 17-AAG; groups have reported that 17-AAG possesses moderate micromolar target potency while achieving low nanomolar growth inhibition in many but not all cell lines (15,49).Chiosis et al. suggested that the differential cell versus target potency for 17-AAG may be explained by the physicochemical characteristics of ansamycins, leading to high intracellular concentrations (49).Kamal et al. (5) reported that 17-AAG binds to HSP90 more tightly in the presence of certain co-chaperones, and that a high-affinity, 17-AAG-sensitive superchaperone complex predominates in cancer cells compared with normal epithelial and endothelial cells.This could explain the greater accumulation in tumor tissue and the reported preferential activity of 17-AAG towards malignant versus normal cells (49).Interestingly, although A, Western blot of HUVEC lysates following treatment with multiples of GI 50 of CCT018159 (1 Â GI 50 = 0.87 Amol/L) for 24 h showing induction of HSP72 and down-regulation of client proteins involved in angiogenesis.FAK, focal adhesion kinase.B, effects of CCT018159 on cell migration in response to chemokines.HUVECs were treated for 24 h with CCT018159 (at 0.87, 1.7, and 4.4 Amol/L), labeled with CellTracker, and migrated towards 5% FCS for 2 h, 20 ng/mL VEGF for 16 h, or 10 nmol/L bFGF for 16 h.Columns, relative number of cells migrating (n = 3); bars, SE.C, effects of CCT018159 (at 0.87, 1.7, and 4.4 Amol/L) on HUVEC differentiation into pseudocapillaries on Matrigel, which is a surrogate assay of the differentiation/tubulogenesis processes used by endothelial cells during neoangiogenesis.HUVECs were pretreated with CCT018159 for 24 h before seeding onto a layer of Matrigel.Tubule area at 24 and 48 h was quantified using Image Pro-Plus.
we found that CCT018159 and 17-AAG were bound about 2-fold more tightly to HSP90 in cell lysates compared with recombinant HSP90h, we observed with both CCT018159 and 17-AAG that binding to HSP90 was comparable in lysates from cancer and nontumorigenic cells.Similar results were reported by others (27,50,51).One explanation for these apparent discrepancies between different studies is that geldanamycin exhibits slow tight binding inhibition, potentially related to conversion of the quinone to the more potent hydroquinone (25,27,50,51).This is consistent with our original observation that 17-AAG is much more potent in cancer cells overexpressing the quinone reductase NQO1, which we showed reduces 17-AAG (15,25).We did not observe a timedependent increase in HSP90h binding potency with 17-AAG.The disparities between various studies could relate to the different binding probes and experimental conditions, especially the presence of reducing agents.Here, we used a fluorescent CCT018159 derivative as the binding probe and did not include reducing agents.Of note, Gooljarsingh et al. ( 50) observed a time-dependent increase in binding with 17-AAG, but not with an isoxazole analogue related to CCT018159, in agreement with our results.It seems possible that, lacking the quinone moiety of the geldanamycins, the biochemical and cellular pharmacology of the pyrazole resorcinols may be less complex.
In contrast to 17-AAG, the lack of dependence of the pyrazole resorcinols on NQO1 was expected as the pyrazoles have no quinone.NQO1 expression varies across tumor and healthy tissues, and NQO1 polymorphism is associated with loss of activity (52).Thus, the independence of the pyrazole resorcinols from NQO1 activity removes a source of metabolic variability and a potential resistance mechanism.Quinone metabolism may contribute to ansaymcin liver toxicity, and it will be interesting to assess the toxicology of the new series using analogues with optimized pharmacokinetic properties.
As with NQO1, the cellular activities of CCT018159 and its analogues are also independent of P-glycoprotein expression.In addition, both the pyrazole resorcinols and 17-AAG are able to retain activity in cancer cells with acquired resistance to oxaliplatin where the resistance was associated with reduced platinum-DNA adduct formation (45).Our results do, however, suggest that care should be taken in considering the potential for resistance to CCT018159 and related compounds metabolism of the resorcinol moiety to glucuronides.Crystal structures (Fig. 2) show that these metabolites could not bind HSP90.Uridine diphosphoglucuronosyltransferases, which catalyze glucuronidation of phenolic hydroxyls, are known to be variably expressed in certain colon, liver, and kidney cancers (53).
Given previous results with 17-AAG (5), it is of interest to compare the activity of CCT018159 in cancer versus nonmalignant cells.Interestingly, HUVECs were particularly sensitive to the growth inhibition by CCT018159 compared with tumor cells.However, two other nontumorigenic epithelial cell lines (MCF10a mammary and PNT2 prostate) showed in general similar or rather reduced sensitivity sensitive to CCT018159 compared with most of the tumor lines.With 17-AAG, HUVEC sensitivity approached that of the most sensitive cancer cells, whereas the nontumorigenic breast and prostate lines tended to have GI 50 values closer to those of the more resistant cancer lines.
Clinical studies with 17-AAG showed that doses that were quite well tolerated, apart from issues with the DMSO-containing formulation, gave good pharmacokinetic exposures resulting in HSP90 inhibition in tumor biopsies, as shown by the validated molecular signature of HSP72 up-regulation and down-regulation of C-RAF and CDK4 proteins (17)(18)(19)(20).Prolonged stable disease was seen in two melanoma patients (17).Melanoma cells are commonly driven by and addicted to the RAS-RAF-mitogen-activated protein/ ERK kinase (MEK)-ERK pathway (54).In melanomas, where this pathway is activated by N-RAS mutation resulting in C-RAF activation, C-RAF depletion by CCT018159 or 17-AAG results in reduced ERK1/2 phosphorylation.Mutations in B-RAF, particularly the V600E form, are common in melanoma (55).We and others showed that B-RAF is a hypersensitive HSP90 client compared with wild type, and that 17-AAG stimulates B-RAF degradation (6,7).Two of the melanoma cell lines used here (SKMEL 2 and SKMEL 5) have wild-type B-RAF, and SKMEL 28 and WM266.4 cells harbored mutant B-RAF (V600E and V600D, respectively; ref. 46).Both CCT018159 and 17-AAG reduced B-RAF protein expression, with the mutants being more sensitive in each case.As reported for 17-AAG (6, 7), CCT018159 sensitivity did not correlate with B-RAF status in the melanoma cells.Down-regulation of ERK1/2 activation is achieved by HSP90 inhibitors depleting either or both the C-RAF and mutant B-RAF drivers of the pathway.Thus, their therapeutic activity may be broader than MEK inhibitors, which show selective activity in B-RAF mutant melanomas (54).
Both CCT018159 and 17-AAG caused accumulation of melanoma and other tumor cells in G 1 , as seen for 17-AAG in several but not all tumor lines (11,16).The stage of cell cycle block by HSP90 inhibitors is cell line and tumor type dependent; for example, G 2 -M arrest is seen in some colon cancer cell lines (11,16).With the melanoma lines, G 1 arrest by both CCT018159 and 17-AAG is consistent with a predominant effect on the critical RAS-RAF-MEK-ERK1/2 pathway that regulates cyclin D1 expression in this tumor type (54).In addition to the same cell cycle effects, we show here that CCT018159 and 17-AAG both induced apoptosis in melanoma cells at equivalent growth inhibitory concentrations (5 Â GI 50 ).The results suggested a greater degree of detached apoptotic cells for CCT08159 than for 17-AAG at 24 h.At 48 h, more apoptotic cells were present with 17-AAG, whereas a greater amount of cell debris was seen with CCT018159.Further studies are required in melanoma and other cell lines to determine any consistent or cell line-specific effects that may be seen in the concentration-and time-dependent effects of the two agents.However, it is clear that both CCT018159 and 17-AAG induce cell cycle arrest and apoptosis.
CCT018159 modulates expression of several key proteins in HUVEC, including HSP72, AKT, and VEGFR-2, confirming that it inhibits HSP90 activity in these cells at concentrations used in functional assays.CCT018159 inhibited HUVEC chemotactic responses to soluble ligands, as well as haptotactic motility, which was associated with decreased FAK phosphorylation.Haptotaxis and tubular differentiation on Matrigel were also inhibited in two different types of human tumor cells.Thus, in addition to inhibiting cell cycle progression and inducing apoptosis, the diaryl pyrazole resorcinol HSP90 inhibitors are likely, as with 17-AAG (38), to exert antiangiogenic and anti-invasive effects in vivo.We also showed recently that CCT018159 and 17-AAG induce keratinocyte differentiation (56).Their combinatorial effects on the multiple phenotypic features of malignancy is a major advantage of HSP90 inhibitors.It is promising that this is shared by the geldanamycin, purine, and diaryl pyrazole series (8,30).
Our objective here was to use CCT018159 and its analogues to exemplify the detailed biological properties of our new diaryl pyrazole resorcinol series of HSP90 inhibitors.The results show that CCT018159 represents the prototype of a novel, synthetic HSP90 inhibitor chemotype with potential advantages over 17-AAG in terms of aqueous solubility, lack of susceptibility to P-glycoprotein, and independence from metabolism by NQO1.Absence of the quinone moiety may reduce hepatotoxicity.The resorcinol hydroxyls are, however, subject to glucuronidation.We recently showed that CCT018159 and its analogues have promising pharmacokinetic properties in mice (44).Structure-based lead optimization has produced more active inhibitors with similar cellular potency to 17-AAG and considerable potential to become a clinical candidate (36).Combinatorial action of HSP90 inhibitors against multiple oncogenic proteins and pathways, which provide the opportunity to modulate all the hallmarks of traits of cancer (8), is a significant feature of these agents.Given the considerable interest in HSP90 as an oncology drug target and the potential limitations of 17-AAG, it seems appropriate to progress several chemical series into preclinical and clinical development.Studies to date with other classes of HSP90 inhibitors have clearly indicated their ability to therapeutic selectivity for cancer versus normal tissues in animal models (15,57).Assessment of therapeutic index will need to be carried out with more fully optimized diaryl pyrazole resorcinol analogues, including determination of effects on those organs for which toxicity has been reported for HSP90 inhibitors, including liver and heart, together with rapidly proliferating tissues, such as gastrointestinal tract and bone marrow.

Figure 1 .
Figure 1.Chemical structures of the different classes of HSP90 inhibitors.

Figure 4 .
Figure 4. Effects of CCT018159 on cell growth, cell cycle, and apoptosis.A, representative DNA histograms and BrdUrd-Hoechst/PI cytograms of SKMEL 5 human melanoma cells following treatment with 41 Amol/L CCT018159 (5 Â GI 50 ) or 0.07 Amol/L 17-AAG (5 Â IC 50 ).BrdUrd (10 Amol/L) and CCT018159 (or 17-AAG) were added at the same time and incubated for 16, 24, 48, and 72 h before fixing with ethanol.Control cells were treated with vehicle and BrdUrd.No BrdUrd or compound was added to control cells at 0 h.Hoechst/PI stain was added immediately before analysis by flow cytometry.The results were replicated in three independent experiments.Results showed that SKMEL 5 cells treated with CCT018159 or 17-AAG caused a G 1 arrest at 16 h.By 24 h, cells in the original G 2 have moved to the new G 1* phase and remained blocked at that point.B, quantitation of attached total cell counts.SKMEL 28 cells were treated with vehicle control (n) or 14.5 Amol/L CCT018159 (.) or 0.105 Amol/L 17-AAG (4) for 0, 24, 48, 72, and 96 h.Attached cells were counted using a hemacytometer.C, detached SKMEL 28 cells (as % total cells) following treatment with 14.5 Amol/L CCT018159, 0.105 Amol/L 17-AAG, or vehicle control for 24 h.D, quantitation of detached cells.Equal amounts of protein were loaded from the detached control and treated SKMEL 28 cells after 72 h, and PARP cleavage was detected in both detached populations by Western blotting.The PARP antibody recognizes the 116-kDa native PARP and the 85-kDa apoptosis-related cleavage product.Lysates from the attached population (72 h) were used as control.Note, however, that although PARP cleavage is seen in both control and treated samples, both HSP90 inhibitors caused an increase in the number of detached, apoptotic cells (C ).

Figure 5 .
Figure 5. Effects of CCT018159 on various properties of endothelial cells.A, Western blot of HUVEC lysates following treatment with multiples of GI 50 of CCT018159 (1 Â GI 50 = 0.87 Amol/L) for 24 h showing induction of HSP72 and down-regulation of client proteins involved in angiogenesis.FAK, focal adhesion kinase.B, effects of CCT018159 on cell migration in response to chemokines.HUVECs were treated for 24 h with CCT018159 (at 0.87, 1.7, and 4.4 Amol/L), labeled with CellTracker, and migrated towards 5% FCS for 2 h, 20 ng/mL VEGF for 16 h, or 10 nmol/L bFGF for 16 h.Columns, relative number of cells migrating (n = 3); bars, SE.C, effects of CCT018159 (at 0.87, 1.7, and 4.4 Amol/L) on HUVEC differentiation into pseudocapillaries on Matrigel, which is a surrogate assay of the differentiation/tubulogenesis processes used by endothelial cells during neoangiogenesis.HUVECs were pretreated with CCT018159 for 24 h before seeding onto a layer of Matrigel.Tubule area at 24 and 48 h was quantified using Image Pro-Plus.

Table 1 .
A. HSP90 inhibitory and binding activities of CCT018159 and analogues

Table 2 .
Sensitivity of human cancer and nontumorigenic cell lines to HSP90 inhibitors NOTE: Values represent mean F SE (n = 3-5).*Transfected with the NQO1 gene for DT-diaphorase