American Association for Cancer Research
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Supplementary Table S10 from Serum Lipidome Profiling Reveals a Distinct Signature of Ovarian Cancer in Korean Women

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posted on 2024-05-01, 07:41 authored by Samyukta Sah, Olatomiwa O. Bifarin, Samuel G. Moore, David A. Gaul, Hyewon Chung, Sun Young Kwon, Hanbyoul Cho, Chi-Heum Cho, Jae-Hoon Kim, Jaeyeon Kim, Facundo M. Fernández

Supplementary Table S10 shows Machine learning performance using the 10-lipid panel and the imbalanced dataset.


National Institutes of Health (NIH)

U.S. Army (USA)

National Science Foundation (NSF)



Distinguishing ovarian cancer from other gynecological malignancies is crucial for patient survival yet hindered by non-specific symptoms and limited understanding of ovarian cancer pathogenesis. Accumulating evidence suggests a link between ovarian cancer and deregulated lipid metabolism. Most studies have small sample sizes, especially for early-stage cases, and lack racial/ethnic diversity, necessitating more inclusive research for improved ovarian cancer diagnosis and prevention. Here, we profiled the serum lipidome of 208 ovarian cancer, including 93 early-stage patients with ovarian cancer and 117 nonovarian cancer (other gynecological malignancies) patients of Korean descent. Serum samples were analyzed with a high-coverage liquid chromatography high-resolution mass spectrometry platform, and lipidome alterations were investigated via statistical and machine learning (ML) approaches. We found that lipidome alterations unique to ovarian cancer were present in Korean women as early as when the cancer is localized, and those changes increase in magnitude as the diseases progresses. Analysis of relative lipid abundances revealed specific patterns for various lipid classes, with most classes showing decreased abundance in ovarian cancer in comparison with other gynecological diseases. ML methods selected a panel of 17 lipids that discriminated ovarian cancer from nonovarian cancer cases with an AUC value of 0.85 for an independent test set. This study provides a systemic analysis of lipidome alterations in human ovarian cancer, specifically in Korean women. Here, we show the potential of circulating lipids in distinguishing ovarian cancer from nonovarian cancer conditions.

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